BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H01SP1|AL426742
(782 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig436 1166 0.0
>3x_Contig436
Length = 1820
Score = 1166 bits (578), Expect = 0.0
Identities = 623/650 (95%), Gaps = 1/650 (0%)
Strand = Plus / Plus
Query: 133 atatttcaattcaacgtatgatattmagaccggcaaaataaaccagcatatggcgaattg 192
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 5 atatttcaattcaacgtatgatattaacaccggcaaaataaaccagcatatggcgaattg 64
Query: 193 cgaccaatataaggmggtccataagamatgamagtttggtgcagtctctagcgcagacga 252
|||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 65 cgaccaatataaggaggtccataagacatgaaagtttggtgcagtctctagcgcagacga 124
Query: 253 taatggtgatatgtcgtcccttgcmgagagtgtagaattgatggggttaggttgcccaat 312
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 125 taatggtgatatgtcgtcccttgcagagagtgtagaattgatggggttaggttgcccaat 184
Query: 313 gccagamctctgagcagcacaaaamacatccaatggmagtcagtctgcgatggagagtaa 372
|||||| ||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||
Sbjct: 185 gccagaactctgagcagcacaaaaaacatccaatggaagtaagtatgcgatggagagtaa 244
Query: 373 gaggmacatattaagcmatagcacaaatmaggtggctggataattgttcttataamgttt 432
|||| ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 245 gaggaacatattaagcaatagcacaaataaggtggctggataattgttcttataaagttt 304
Query: 433 gamcgataaaacccgattgacaaagtaaaaagcagccacagccatgamtatmactgccag 492
|| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||
Sbjct: 305 gaacgataaaacccgattgacaaagtaaaaagcagccacagccatgaatataactgcaag 364
Query: 493 tcaaagcmgtagccatagtgctctcattggatatttttcmagtccttgtctggactacca 552
| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 365 taaaagcagtagccatagtgctctcattggatatttttcaagtccttgtctggactacca 424
Query: 553 acmaacacaccggtcaatgttttcaaagtcttactgatttacacccttgcttccgtttat 612
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acaaacacaccggtcaatgttttcaaagtcttactgatttacacccttgcttccgtttat 484
Query: 613 ttatmtttcttttctttatttttggctttactttataatatgaatatcgamagtgctaat 672
|||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 485 ttatatttattttctttatttttggctttactttataatatgaatatcgaaagtgctaat 544
Query: 673 ttaaatattgtcaacttaagataagtccgcgccagcagaaatagtgcccatcctgacatt 732
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 545 ttaaatattgtcaacttaagataagtccg-gccagcagaaatagtgcccatcctgacatt 603
Query: 733 tcattcgttagaagtcaatcgaaaactaaagttagcatgagtcttaattt 782
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tcattcgttagaagtcaatcgaaaactaaagttagcatgagtcttaattt 653
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4256
Number of Sequences: 1807
Number of extensions: 4256
Number of successful extensions: 101
Number of sequences better than 1.0e-20: 1
length of query: 782
length of database: 10,358,551
effective HSP length: 16
effective length of query: 766
effective length of database: 10,329,639
effective search space: 7912503474
effective search space used: 7912503474
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)